RNA-MoIP is an integer programming framework that refines predicted secondary structures (i.e. removes incorrect canonical base-pairs) to accommodate the insertion of RNA 3D motifs (i.e. hairpins, internal loops and k-way junctions). The predictions can be used as templates to generate complete 3D structures with the MC-Sym program.


Latest version: 1.0.0:
Source CodeRNAMoIP.py
Motif DatabaseCATALOGUE.tgz

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