Computational Structural Biology

School of Computer Science

McGill University

RNA Algorithmics

We design algorithms to predict RNA structures and explore their mutational landscape. Applications of these techniques range from evolutionary studies to the design of RNA with target folding properties.

Protein Folding

We develop computational tools to predict the folding dynamics and assembly of proteins. Our research has a strong emphasis on β-sheet proteins and Amyloid fibrils.

Human-Computing Games

Video games are not just fun, they also provide us an amazing tools to harness the computational power of crowds on the web. We develop video games to solve hard problems in genomics.

WEB SERVICES


Open-Phylo
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RNAmutants
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tFolder
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RNA-MoIP
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PartiFold
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Fibrilizer
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SPARCS
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Phylo
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IncaRNAtion
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CorRna
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RNApyro
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PUBLICATIONS


Articles in Refereed Journals


Articles in Refereed Conference Proceedings


Books or Book Chapters


MEMBERS



Jérôme Waldispühl

Assistant professor in Computer Science. Group Leader.


Olivier Tremblay-Savard

Post-doctoral fellow. Crowdsourcing & Human-computing games.


Mohamed Smaoui

PhD Candidate. Proteomics & Structural Bioinformatics.


Vladimir Reinharz

PhD Student. Algorithms & RNA Bioinformatics.


Antoine Soulé

PhD student. RNA Bioinformatics.


David Becerra

PhD student. Protein folding.


Mohammed Shamrani

PhD student. Molecular computing & DNA nanotechnology.


Alexander Butyaev

PhD student. Crowdsourcing & Human-Computing games.


Yang (Olivia) Zhang

M.Sc. student. RNA Bioinformatics.


Carlos Gonzalez Oliver

Undergraduate student. RNA Evolution.


Jonathan Eidelman

Undergraduate student. Dynamic programming framework for RNA Bioinformatics .


Hai Tong Yang

Undergraduate student. RNA Bioinformatics.

CONTACT


Our lab is located at the third floor of the Trottier Building:


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Contact Information

(Laboratory) 3630 University Street, Room 3106, Montreal QC
(Mailing address) 3480 University Street, Room 318, McConnell Engineering Bldg, Montreal QC H3A 0E9
(E-mail) jerome.waldispuhl@mcgill.ca
(Phone) +1 514 398 5018

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